) DNA G C content material (bp) Quantity of replicons Extra-chromosomal elements Total
Variety of genes related together with the 25 general COG functional categories Code Value age Description J A K L B D Y V T M N Z W U O C G E F H I P Q R S 208 1 352 162 1 42 48 332 275 159 1 140 156 230 265 439 90 177 152 268 122 515 388 1,008 4.60 0.02 7.78 3.58 0.02 0.93 1.06 7.34 six.08 three.52 0.02 3.10 3.45 five.09 five.86 9.71 1.99 3.91 3.36 five.93 2.70 11.39 8.58 20.08 Translation RNA processing and modification Transcription Replication, recombination and repair Chromatin structure and dynamics Cell cycle manage, mitosis and meiosis Nuclear structure Defense mechanisms Signal transduction mechanisms Cell wall/membrane biogenesis Cell motility Cytoskeleton Extracellular structures Intracellular trafficking and secretion Posttranslational modification, protein turnover, chaperones Energy production and conversion Carbohydrate Or utilized to map interactions at residue-resolution. Therefore in our original transport and metabolism Amino acid transport and metabolism Nucleotide transport and metabolism Coenzyme transport and metabolism Lipid transport and metabolism Inorganic ion transport and metabolism Secondary metabolites biosynthesis, transport and catabolism Basic function prediction only Function unknown Not in COGshttp://standardsingenomics.orgPseudomonas syringae pathovar syringae strain BFigure 2. Redfield valuable ideas around the gap closure along with the annotation procedures. This project was supported by theAcknowledgementsSwiss National Science Foundation (31003A-134936) plus the Foundation for Research in Science and the Humanities in the University of Zurich. 2. Gonz ez AJ, Landeras E, Mendoza MC. Pathovars of causing bacterial brown spot and halo blight in Phaseolus vulgaris PubMed ID:https://www.ncbi.nlm.nih.gov/pubmed/21231855 L. are distinguishaStandards in Genomic Sciences Functionally Distinct Su.) DNA G+C content (bp) Quantity of replicons Extra-chromosomal components PubMed ID:https://www.ncbi.nlm.nih.gov/pubmed/24756377 Total genes Protein-coding genes RNA genes rRNA genes 5S rRNA 16S rRNA 23S rRNA tRNA genes rRNA operons Pseudo-genes Protein coding genes with function prediction with out function predictiona Protein coding genes with COGs with KOGs with Pfam with TIGRfam in paralog clusters Proteins with signal peptides Proteins with transmembrane helicesa asyringofactin, kind VI pili, massive surface adhesins, siderophores pyoverdine and achromobactin, proteases along with other secreted hydrolytic enzymes, RND-type transporters (including putative mexAB, mexCD, mexEF, and mexMN homologs [60,61]), all of that are located in other P. syringae strains. It's also notable that inaZ gene encoding icenucleation protein is truncated by a frameshift, hence producing this strain ice-negative. The latter contradicts benefits of a prior study by Hwang and colleagues  in which Pss B64 has been identified to become ice-positive. This could possibly be as a consequence of an assembly error, or the frameshift could have been introduced at a later point for the duration of propagation.Value 5,930,035 56,737 5,146,184 three,472,195 1 0 5,021 four,869 74 13 five four four 61 four 78 four,200 669 4,013 1,698 four,256 1,641 three,933 511 1,112 of Total one hundred.00 0.96 86.78 58.55 one hundred.00 96.97 1.47 0.26 0.10 0.08 0.08 1.21 1.55 83.65 13.32 79.92 33.82 84.76 32.68 78.33 10.18 22.excluding pseudo-genes; hence percentage values differ from these displayed in the IMG/ER Requirements in Genomic SciencesDudnik et al.